The Peptide CommonsEst. May 2024
Independent. We sell nothing and are affiliated with no manufacturer or pharmacy. Every moderation action is logged in public
Analytics · Method validation · continued

Second pass at: LOD and LOQ: definitions people get wrong posts 31–52

This is a continuation of a long topic, addressed by post number rather than by page. Start at post 1.

O
OTeixeiraTL3Regular4 Sep 2025#31

Transfer between laboratories: a method can be transferred from one lab to another, but the receiving lab needs to demonstrate that they can achieve the same performance. This requires comparative testing and sometimes small method refinements.

30 likes 11mo
SO
s.oyelaranTL2 Moderator5 Sep 2025#32
b.correia, post #17: Transfer between laboratories: a method can be transferred from one lab to another, but the receiving lab needs to demonstrate that they can achieve the same performance. This requires comparative testing and sometimes small method refinements. Go to post

Stability-indicating method: one that can separate a compound from its degradation products. Critical for assay methods that claim to measure actual degradation (as opposed to purity, which is orthogonal).

15 likes in reply to #17 11mo
CD
cohort_driftTL3Regular5 Sep 2025#33
o.pasquale, post #29: This follows post #26 rather than contradicting it. Forced degradation studies: deliberately stress the material with acid, base, oxidant, heat, light to generate degradation products and demonstrate that the method can separate them from the parent peak. Acceptance is that the method is stability-indicating. Go to post

Linearity: the detector response is proportional to compound concentration across the working range. Demonstrated by running standards at multiple concentrations and showing R-squared values typically ≥0.99.

3 likes in reply to #29 11mo
IO
i.oseiTL2 Moderator6 Sep 2025#34

This follows post #31 rather than contradicting it.

Why two laboratories may disagree: after validating the same method, they may still report different purity on the same sample due to integration differences, column age differences, subtle differences in mobile phase pH or temperature. This is normal and not a sign that one is wrong.

0 likes 11mo
EM
endpoint_marginTL2Member6 Sep 2025#35

On post #31 — agreed on the reasoning, with one qualification.

Forced degradation studies: deliberately stress the material with acid, base, oxidant, heat, light to generate degradation products and demonstrate that the method can separate them from the parent peak. Acceptance is that the method is stability-indicating.

22 likes 11mo
BT
b.teixeiraTL2 Moderator7 Sep 2025#36
IMainwaring, post #4: Precision and repeatability: within-run and between-run variability of the method. Acceptance criterion is typically a relative standard deviation of ≤2% for area measurements. Go to post

System suitability: injections run at the start of a batch to establish that the instrument and column are performing. Acceptance criteria typically include replicate precision (RSD ≤2%), peak tailing (0.8–1.5), theoretical plates (>2000), and resolution (>1.5).

10 likes in reply to #4 11mo
M
MJayawardenaTL3Regular7 Sep 2025#37

Limits of detection and quantitation: LOD is the lowest concentration that produces a signal above background. LOQ is the lowest concentration at which the method meets precision and accuracy acceptance criteria. Both are determined empirically.

1 like 11mo
RC
r.coelhoTL2 Moderator8 Sep 2025 · edited#38

I disagree with the reply above, and I think the disagreement is substantive rather than terminological.

The distinction being drawn does not survive when you look at the published data for this specific question. I would be glad to be shown wrong on this, because the version I am arguing against is more convenient.

0 likes 11mo
AS
a.salcedoTL3Regular9 Sep 2025#39
MJayawardena, post #37: Limits of detection and quantitation: LOD is the lowest concentration that produces a signal above background. LOQ is the lowest concentration at which the method meets precision and accuracy acceptance criteria. Both are determined empirically. Go to post

Range: the concentration range over which the method has been validated. Going outside the validated range is going outside the method's demonstrated performance.

16 likes in reply to #37 11mo
KH
ka.haddadTL2 Moderator9 Sep 2025#40
o.pasquale, post #29: This follows post #26 rather than contradicting it. Forced degradation studies: deliberately stress the material with acid, base, oxidant, heat, light to generate degradation products and demonstrate that the method can separate them from the parent peak. Acceptance is that the method is stability-indicating. Go to post

post #39 is right about the mechanism and I think understates the practical bit.

Precision and repeatability: within-run and between-run variability of the method. Acceptance criterion is typically a relative standard deviation of ≤2% for area measurements.

6 likes in reply to #29 11mo
JI
j.iyerTL2 Moderator10 Sep 2025#41

For anyone arriving from a search: the marked solution above is the direct answer, and the replies underneath it add the caveats that make it safe to use.

0 likes 11mo
B
batchlogTL310 Sep 2025#42
SK
s.kuuselaTL2 Moderator11 Sep 2025 · edited#43

This follows post #40 rather than contradicting it.

Robustness: the method gives consistent results when minor parameters vary. Tested by deliberately varying pH, temperature, flow rate, and mobile phase composition within reasonable ranges and demonstrating that results stay within acceptance.

10 likes 11mo
TY
two_year_lineTL3Regular11 Sep 2025#44

I read post #42 twice before replying, because I had assumed the opposite.

Specificity: the method can distinguish the intended compound from related impurities and degradation products. Tested by comparing results on pure compounds, mixtures of compounds, and degraded samples.

22 likes 11mo
GR
g.radichTL2 Moderator12 Sep 2025#45

post #44 answers the question as asked. The question underneath it is different.

System suitability: injections run at the start of a batch to establish that the instrument and column are performing. Acceptance criteria typically include replicate precision (RSD ≤2%), peak tailing (0.8–1.5), theoretical plates (>2000), and resolution (>1.5).

0 likes 10mo
MM
maintenance_modeTL3Regular12 Sep 2025#46
s.ivaturi, post #28: Two things before anyone answers the substance. First, the context in the first post is clear and specific. Second, the question is framed so that an answer can actually address it. Both are the norm here and both matter more than they sound. Go to post

Forced degradation studies: deliberately stress the material with acid, base, oxidant, heat, light to generate degradation products and demonstrate that the method can separate them from the parent peak. Acceptance is that the method is stability-indicating.

1 like in reply to #28 10mo
KP
k.pereiraTL2 Moderator13 Sep 2025#47

Range: the concentration range over which the method has been validated. Going outside the validated range is going outside the method's demonstrated performance.

6 likes 10mo
RV
r.venkatesanTL3Wiki editor13 Sep 2025#48

Coming back to post #46, because the follow-up matters more than the original answer.

Having read the exchange above, I think I was wrong earlier in this topic and I want to say so plainly rather than quietly editing.

The correction was fair and I had been repeating something I had not checked carefully enough.

16 likes 10mo
HB
h.brandtTL2 Moderator14 Sep 2025#49

post #48 is right about the mechanism and I think understates the practical bit.

Limits of detection and quantitation: LOD is the lowest concentration that produces a signal above background. LOQ is the lowest concentration at which the method meets precision and accuracy acceptance criteria. Both are determined empirically.

2 likes 10mo
IS
isotonic_sheetTL3Regular14 Sep 2025 · edited#50

Worth separating two things that post #46 runs together.

Stability-indicating method: one that can separate a compound from its degradation products. Critical for assay methods that claim to measure actual degradation (as opposed to purity, which is orthogonal).

9 likes 10mo
NS
n.serranoTL2 Moderator15 Sep 2025#51

Practical note that does not fit anywhere else. Whatever you conclude from this topic, write down what you did and when. The single most useful thing in your own records is not any individual result; it is that they are dated and consecutive.

0 likes 10mo
RM
r.marsdenTL3Regular15 Sep 2025#52
vial_slope, post #8: Forced degradation studies: deliberately stress the material with acid, base, oxidant, heat, light to generate degradation products and demonstrate that the method can separate them from the parent peak. Acceptance is that the method is stability-indicating. Go to post

Accuracy: the method measures what you intend to measure. For purity methods, this is tested by spike-and-recover experiments: add a known amount of impurity to a sample and measure whether you recover the added amount.

21 likes in reply to #8 10mo

Suggested topics

TopicParticipantsRepliesViewsActivity
Relative retention time as a better inter-laboratory comparator
On the subject in the title: Relative retention time as a better inter-laboratory comparator Working notes rather than a conclusion. Posting the method first, because I know what the first three replies will…
MCVKSKHVCL+7 11 28k 14mo
Specificity, linearity, accuracy, precision, range, robustness — with real criteria
Specificity, linearity, accuracy, precision, range, robustness — with real criteria Writing it up because I had to work it out twice and would rather nobody else did. I would like to understand what this…
FNISMLAWM+44 48 12k 1d
Forced degradation studies: designing one that is informative — does this still hold?
The question in the title: Forced degradation studies: designing one that is informative — does this still hold? I will give what I have already checked below so nobody repeats it. A documentation question…
RJAKNKISC+37 41 1.2k 12mo
Revisiting: Spike-and-recover accuracy for a peptide assay
Revisiting: Spike-and-recover accuracy for a peptide assay — setting out what I have, and where I think it stops being reliable. I would like to understand what this number means before I repeat it anywhere.…
SCVKEC 2 6.8k 21h
Validating a method you did not develop
On the subject in the title: Validating a method you did not develop Working notes rather than a conclusion. I would like to understand what this number means before I repeat it anywhere. A VendorInvestigate…
CRSOSSSVJW+10 14 15k 3mo

Related topics — sharing the tags recovery, precision & repeatability, linearity

TopicParticipantsRepliesViewsActivity
What a simple presence test is genuinely useful for — does this still hold?
What a simple presence test is genuinely useful for — does this still hold? I have a specific reason for asking rather than idle curiosity, and the context is below. I would like to understand what this…
HFRLRA 2 22k 16mo
Coming back to: Where the integrator drew the baseline, and how much it moved the number
On the subject in the title: Where the integrator drew the baseline, and how much it moved the number Working notes rather than a conclusion. Posting the method first, because I know what the first three…
AHNMTNAFMB+20 24 2.7k 10mo
About the Home & field testing category
What consumer-accessible tests can and cannot tell you. Mostly a subcategory about limitations. This post is a community wiki: any member at trust level 3 or above can edit it, and every edit is recorded with…
JMKPIILHL 4 51k 11mo
Coming back to: Specificity, linearity, accuracy, precision, range, robustness — with real criteria
On the subject in the title: Specificity, linearity, accuracy, precision, range, robustness — with real criteria Working notes rather than a conclusion. Posting the method first, because I know what the first…
AWHNFJCOT+93 99 1.4k 6d
Specificity, linearity, accuracy, precision, range, robustness — with real criteria — a second dataset
On the subject in the title: Specificity, linearity, accuracy, precision, range, robustness — with real criteria — a second dataset Working notes rather than a conclusion. Working through the identity…
MSHFDBTDLG+53 58 7.5k 6mo