The Peptide CommonsEst. May 2024
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Tags · Technique

counter-ion content

Acetate or TFA content and its effect on measured peptide mass.

60 topics 17 solved Synonyms: tfa Group: Technique

Related in this group: HPLC · LC-MS · high-resolution MS · MALDI-TOF · UV & DAD detection · peak integration · system suitability · gradient method · water content · amino acid analysis · ELISA · endotoxin testing

60 topics · page 2 of 2

TopicParticipantsRepliesViewsActivity
Second pass at: MALDI versus ESI for a quick identity check
Second pass at: MALDI versus ESI for a quick identity check Writing it up because I had to work it out twice and would rather nobody else did. Something about MALDI versus ESI does not reconcile and I would…
MALKO 2 18k 7mo
[2026 update] Why mass spectrometry cannot tell you about an epimer
Why mass spectrometry cannot tell you about an epimer — that is the question, and I have not found it answered plainly anywhere I have looked. Working through the identity arithmetic and I would like it…
GTAPFP 2 1k 8mo
Revisiting: Aggregates and why a purity assay may miss them entirely
Posting this under the heading it deserves: Revisiting: Aggregates and why a purity assay may miss them entirely Everything below is what sits behind that. I would like to disagree carefully with the settled…
LVNCOLNVMS+48 53 918 8mo
High-resolution MS on aggregates and what it can see
Posting this under the heading it deserves: High-resolution MS on aggregates and what it can see Everything below is what sits behind that. Something about high-resolution does not reconcile and I would like…
CRGISCBPEC+117 123 6.5k 8mo
Particulates in a reconstituted solution: identifying the likely source
Posting this under the heading it deserves: Particulates in a reconstituted solution: identifying the likely source Everything below is what sits behind that. Something about particulates does not reconcile…
SCNECCYMRM+15 19 13k 9mo
What a 2 ppm match establishes, and what it does not
What a 2 ppm match establishes, and what it does not — that is the question, and I have not found it answered plainly anywhere I have looked. Working through the identity arithmetic and I would like it…
JVBPSOOAK+56 60 5.2k 9mo
Deconvolution of a multiply charged envelope
Deconvolution of a multiply charged envelope — setting out what I have, and where I think it stops being reliable. Working through the identity arithmetic and I would like it checked. tirzepatide has a…
IDIAJV 2 63 10mo
Coming back to: Oxidation and deamidation mass shifts, tabulated
Oxidation and deamidation mass shifts, tabulated — setting out what I have, and where I think it stops being reliable. Reading back through what has been written here about Oxidation and deamidation mass…
HFSLADAKTI+34 38 4.8k 10mo
Second pass at: Isotonicity and what happens when you get it wrong
Second pass at: Isotonicity and what happens when you get it wrong — setting out what I have, and where I think it stops being reliable. Something about Isotonicity does not reconcile and I would like a…
NSFNCATHRE+1 5 2.6k 11mo
Counter-ion content and its effect on measured mass
On the subject in the title: Counter-ion content and its effect on measured mass Working notes rather than a conclusion. Something about counter-ion content does not reconcile and I would like a second pair…
JTFAIDGHIO+100 108 45k 12mo
Reading an MS report that only gives you a single number
On the subject in the title: Reading an MS report that only gives you a single number Working notes rather than a conclusion. I would like to understand what this number means before I repeat it anywhere. A…
BDSBCDAMBR+100 113 48k 13mo
Particulates in a reconstituted solution: identifying the likely source — what changed since
Particulates in a reconstituted solution: identifying the likely source — what changed since — setting out what I have, and where I think it stops being reliable. What changes if the standard account of…
GPMSCV 2 129 14mo
Residual solvents and scavengers: what is looked for
On the subject in the title: Residual solvents and scavengers: what is looked for Working notes rather than a conclusion. I would like to know what people here actually do about residual solvents and…
DOEVABKPLG+19 23 39k 14mo
Coming back to: Oxidation pathways for methionine and tryptophan
Oxidation pathways for methionine and tryptophan Writing it up because I had to work it out twice and would rather nobody else did. Reading back through what has been written here about Oxidation pathways for…
YRFHKRZSCP+1 5 36k 15mo
Deamidation and the close-eluting pair it produces
Deamidation and the close-eluting pair it produces Writing it up because I had to work it out twice and would rather nobody else did. Something about deamidation does not reconcile and I would like a second…
IARMASPKA+33 37 46k 15mo
Preservatives: function, testing, and limits
Preservatives: function, testing, and limits — setting out what I have, and where I think it stops being reliable. An honest uncertainty about preservatives rather than a disguised assertion. I do not know…
JDMAVSNHST+23 27 3.7k 16mo
Oxidation and deamidation mass shifts, tabulated
Posting this under the heading it deserves: Oxidation and deamidation mass shifts, tabulated Everything below is what sits behind that. Oxidation and deamidation mass shifts, and specifically the version of…
AFJVIATNCS+67 76 21k 16mo
Charge states for a 4 kDa peptide, worked through
On the subject in the title: Charge states for a 4 kDa peptide, worked through Working notes rather than a conclusion. Working through the identity arithmetic and I would like it checked. retatrutide has a…
JPERBEBWBJ+124 146 15k 16mo
Isotope patterns and why the monoisotopic peak is not the tallest
Isotope patterns and why the monoisotopic peak is not the tallest — setting out what I have, and where I think it stops being reliable. Isotope patterns: what I expected, what I found, and the gap between…
EKFHPNMBUC+12 16 7.5k 17mo
Follow-up: Attributing a new peak: degradation product or excipient?
Attributing a new peak: degradation product or excipient? I have a specific reason for asking rather than idle curiosity, and the context is below. A follow-up question about Attributing a new peak that I did…
KIABCSGV+15 19 671 17mo
Coming back to: Adsorption to container surfaces and to plastics
Adsorption to container surfaces and to plastics — setting out what I have, and where I think it stops being reliable. Adsorption — I have the observation and I do not trust my interpretation of it, so I am…
FVGEL 2 459 17mo
Attributing a new peak: degradation product or excipient?
Asking directly, because I could not find a straight answer: Attributing a new peak: degradation product or excipient? A narrow question about attributing a new peak, deliberately narrow, because the broad…
SHOWM 2 15k 18mo
Reading an MS report that only gives you a single number — the long version
Reading an MS report that only gives you a single number — the long version — setting out what I have, and where I think it stops being reliable. I would like to understand what this number means before I…
TTRAK 2 47k 18mo
Isotonicity and what happens when you get it wrong
On the subject in the title: Isotonicity and what happens when you get it wrong Working notes rather than a conclusion. I was wrong about isotonicity in a thread last spring and I would like to correct it…
ITDVILSSTK+27 31 11k 18mo
Oxidation pathways for methionine and tryptophan
Posting this under the heading it deserves: Oxidation pathways for methionine and tryptophan Everything below is what sits behind that. Working notes on oxidation pathways for methionine rather than a…
GVQZILUCZC+58 63 1k 19mo
Buffers, pH and why a formulation is a formulation
Buffers, pH and why a formulation is a formulation Writing it up because I had to work it out twice and would rather nobody else did. A formulation question rather than a pharmacological one, though the two…
BEVLGSODB+11 15 51k 21mo
Second pass at: Buffers, pH and why a formulation is a formulation
Second pass at: Buffers, pH and why a formulation is a formulation Writing it up because I had to work it out twice and would rather nobody else did. Posting a small dataset on Buffers. It is mine, it is…
SCRPADYRC+24 28 1.5k 21mo
Follow-up: Trifluoroacetate content and its consequences
On the subject in the title: Trifluoroacetate content and its consequences Working notes rather than a conclusion. A follow-up question about Trifluoroacetate content that I did not know to ask the first…
AVABAZDTRG+12 16 5.7k 21mo
Coming back to: Deconvolution of a multiply charged envelope
On the subject in the title: Deconvolution of a multiply charged envelope Working notes rather than a conclusion. Working through the identity arithmetic and I would like it checked. tirzepatide has a…
VRCVEL 2 12k 22mo
High-resolution MS on aggregates and what it can see — one year on
High-resolution MS on aggregates and what it can see — one year on Writing it up because I had to work it out twice and would rather nobody else did. A narrow question about High-resolution, deliberately…
NGNDBEIWCO+54 58 1.2k 23mo